Basic Information
Locus ID:
gene.Posoc05g13900
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
gag-polypeptide of LTR copia-type
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 189721296 | 189725640 | + | gene.Posoc05g13900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 31,837.51 Da | 42.85 | 95.24 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07859 | alpha/beta hydrolase fold | 172 | 246 | 5.8E-9 | IPR013094 |
| Gene3D | G3DSA:3.40.50.1820 | alpha/beta hydrolase | 153 | 290 | 6.2E-7 | IPR029058 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_010270024.1 | PREDICTED: uncharacterized protein LOC104606492 [Nelumbo nucifera] | 0 |
| Q94HW2 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1U8AQB4 | uncharacterized protein LOC104606492 OS=Nelumbo nucifera OX=4432 GN=LOC104606492 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology