Basic Information
Locus ID:
gene.Posoc05g11880
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Short Name:
CPK13
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 175446983 | 175457689 | - | gene.Posoc05g11880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.40 | 22,353.55 Da | 46.49 | 87.59 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 56 | 130 | 4.31E-9 | IPR011009 |
| Gene3D | G3DSA:1.10.472.10 | - | 151 | 187 | 5.9E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 76 | 133 | 3.5E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 52 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G74740.1 | calcium-dependent protein kinase 30. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_013449631.1 | calcium-dependent protein kinase 32 [Medicago truncatula] | 0 |
| Q9SSF8 | Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana OX=3702 GN=CPK30 PE=1 SV=1 | 0 | |
| TrEMBL | A7X9M3 | Calcium-dependent protein kinase (Fragment) OS=Physcomitrium patens OX=3218 GN=CPK24 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg16308 |
| Arecaceae | Cocos nucifera | 3 | scaffold014035G000030, scaffold014035G000040 ... |
| Posidoniaceae | Posidonia oceanica | 14 | gene.Posoc01g21110, gene.Posoc02g09000, gene.Posoc02g20180 ... |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_6_RagTag.1078 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-15578 |
| Salicaceae | Populus euphratica | 1 | populus_peu35870 |
| Zosteraceae | Zostera marina | 1 | Zosma03g11290.v3.1 |