HalophFGD

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Basic Information
Locus ID: gene.Posoc05g10600
Species & Taxonomic ID: Posidonia oceanica & 55489
Genome Assembly: GCA_037176725.1
Description: Leucine Rich repeats (2 copies)
Maps and Mapping Data
Chromosome Start End Strand ID
Chr05 155482922 155483672 + gene.Posoc05g10600
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.64 18,361.77 Da 37.32 86.45 -0.14
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 80 151 6.39E-9 IPR011009
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 86 155 1.9E-14 -
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 110 132 - IPR017441
Gene Ontology
Molecular Function:
GO:0005524 (ATP binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G14510.1 Leucine-rich repeat protein kinase family protein. 0
RefSeq XP_042465194.1 probable LRR receptor-like serine/threonine-protein kinase At1g05700 [Zingiber officinale] 0
Swiss-Prot Q9ZQR3 Leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510 OS=Arabidopsis thaliana OX=3702 GN=At2g14510 PE=1 SV=1 0
TrEMBL A0A8J5HEK9 Protein kinase domain-containing protein OS=Zingiber officinale OX=94328 GN=ZIOFF_016588 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Eleusine coracana subsp. coracana 1 gene-QOZ80_6AG0532990
Poaceae Lolium multiflorum 1 gene-QYE76_057047
Poaceae Oryza coarctata 1 Oco21G010000
Poaceae Oryza sativa 2 LOC_Os09g17890.1, LOC_Os09g22300.1
Poaceae Thinopyrum elongatum 1 Tel1E01G552100
Poaceae Zoysia japonica 1 nbis-gene-13861
Posidoniaceae Posidonia oceanica 2 gene.Posoc05g10600, gene.Posoc08g12640
Rhizophoraceae Rhizophora mangle 6 nbisL1-mrna-21362, nbisL1-mrna-24214, nbisL1-mrna-24215 ...
nbisL1-mrna-24217, nbisL1-mrna-24625, nbisL1-mrna-24626
Zosteraceae Zostera marina 1 Zosma02g14880.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.