Basic Information
Locus ID:
gene.Posoc05g06230
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 29087275 | 29102567 | + | gene.Posoc05g06230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 89,958.16 Da | 51.02 | 83.60 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 206 | 298 | 1.3E-6 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 406 | 668 | 1.4E-91 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 200 | 299 | 7.85E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 190 | 342 | 7.5E-12 | IPR011333 |
| SMART | SM00225 | BTB_4 | 210 | 318 | 0.0075 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 210 | 282 | 10.323363 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 405 | 692 | 90.780968 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 162 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_008800153.1 | BTB/POZ domain-containing protein At5g03250-like isoform X1 [Phoenix dactylifera] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1D1XLW7 | BTB/POZ domain-containing protein At5g03250 OS=Anthurium amnicola OX=1678845 GN=At5g03250_1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology