Basic Information
Locus ID:
gene.Posoc05g05390
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
SOUL heme-binding protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 22289656 | 22294589 | - | gene.Posoc05g05390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.13 | 38,140.34 Da | 35.26 | 73.22 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04832 | SOUL heme-binding protein | 173 | 261 | 7.1E-11 | IPR006917 |
| SUPERFAMILY | SSF56219 | DNase I-like | 54 | 162 | 7.02E-5 | IPR036691 |
| SUPERFAMILY | SSF55136 | Probable bacterial effector-binding domain | 174 | 234 | 2.67E-9 | IPR011256 |
| Gene3D | G3DSA:3.20.80.10 | Regulatory factor, effector binding domain | 168 | 239 | 2.3E-11 | IPR011256 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58580.1 | DNAse I-like superfamily protein. | 0 |
| RefSeq | XP_038989240.1 | heme-binding-like protein At3g10130, chloroplastic isoform X2 [Phoenix dactylifera] | 0 |
| Q9M2F8 | Carbon catabolite repressor protein 4 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CCR4-2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453R9N7 | SOUL heme-binding family protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Posidoniaceae | Posidonia oceanica | 11 | gene.Posoc01g09780, gene.Posoc01g18270, gene.Posoc01g19460 ... |