Basic Information
Locus ID:
gene.Posoc05g05060
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 20334457 | 20335626 | - | gene.Posoc05g05060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 42,556.48 Da | 51.01 | 71.75 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 167 | 212 | 3.2E-14 | IPR006652 |
| Pfam | PF00646 | F-box domain | 11 | 52 | 4.0E-7 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 124 | 165 | 4.3E-5 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 50 | 2.22E-6 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 96 | 370 | 7.32E-41 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 86 | 376 | 9.8E-38 | IPR015915 |
| SMART | SM00612 | kelc_smart | 179 | 226 | 1.6E-9 | IPR006652 |
| SMART | SM00612 | kelc_smart | 130 | 178 | 2.9E-4 | IPR006652 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 92 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59940.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_009405095.1 | PREDICTED: F-box/kelch-repeat protein SKIP20-like [Musa acuminata subsp. malaccensis] | 0 |
| Q9M1Y1 | F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NUD8 | Kelch repeat-containing F-box family protein OS=Zostera marina OX=29655 GN=ZOSMA_5G02670 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology