Basic Information
Locus ID:
gene.Posoc05g04400
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 15548829 | 15583619 | + | gene.Posoc05g04400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 108,548.81 Da | 32.94 | 88.89 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11721 | Malectin domain | 431 | 614 | 1.6E-44 | IPR021720 |
| Pfam | PF00069 | Protein kinase domain | 807 | 930 | 1.5E-9 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 301 | 360 | 6.8E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 703 | 804 | 4.2E-15 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 101 | 384 | 3.29E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 684 | 949 | 1.83E-56 | IPR011009 |
| Gene3D | G3DSA:2.60.120.430 | - | 429 | 619 | 3.8E-37 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 668 | 774 | 6.5E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 804 | 945 | 1.3E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 219 | 5.3E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 220 | 405 | 7.8E-44 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 699 | 939 | 15.425155 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 705 | 727 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_029116218.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X3 [Elaeis guineensis] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8N4IC35 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X3 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105059842 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology