Basic Information
Locus ID:
gene.Posoc05g04310
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 15108870 | 15130086 | + | gene.Posoc05g04310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 109,130.85 Da | 45.38 | 82.06 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 791 | 947 | 2.09106E-59 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 364 | 946 | 2.4E-86 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 75 | 183 | 7.2E-21 | IPR006615 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 362 | 949 | 1.2E-105 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 53 | 183 | 2.62E-24 | IPR035927 |
| Gene3D | G3DSA:3.30.2230.10 | - | 41 | 196 | 2.2E-34 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 197 | 281 | 3.8E-10 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 350 | 588 | 1.3E-67 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 698 | 955 | 2.5E-56 | - |
| SMART | SM00695 | dusp | 71 | 186 | 4.8E-25 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 364 | 949 | 57.470024 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 52 | 183 | 17.822025 | IPR006615 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 365 | 380 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 891 | 908 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 37 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_008794941.2 | ubiquitin carboxyl-terminal hydrolase 5 isoform X1 [Phoenix dactylifera] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9P215 | Ubiquitin carboxyl-terminal hydrolase OS=Zostera marina OX=29655 GN=ZOSMA_42G00600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology