Basic Information
Locus ID:
gene.Posoc05g04180
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Glyco_18
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 14536636 | 14537859 | - | gene.Posoc05g04180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 45,400.77 Da | 40.90 | 83.66 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 51 | 378 | 4.3E-55 | IPR001223 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 38 | 382 | 1.02E-54 | IPR017853 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 279 | 349 | 1.04E-12 | IPR029070 |
| Gene3D | G3DSA:3.10.50.10 | - | 278 | 349 | 9.5E-83 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 55 | 378 | 9.5E-83 | - |
| SMART | SM00636 | 2g34 | 37 | 378 | 4.0E-65 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 37 | 407 | 51.73941 | IPR001223 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19800.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_017701878.2 | class V chitinase-like [Phoenix dactylifera] | 0 |
| U5N4E3 | Nod factor hydrolase protein 1 OS=Medicago truncatula OX=3880 GN=NFH1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A843TLB1 | GH18 domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_004832 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology