Basic Information
Locus ID:
gene.Posoc05g04040
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
gag-polypeptide of LTR copia-type
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 14200516 | 14207524 | - | gene.Posoc05g04040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.80 | 34,626.16 Da | 65.50 | 60.71 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 126 | 161 | 5.65E-5 | IPR036875 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 142 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015167476.1 | PREDICTED: uncharacterized protein LOC107061943 [Solanum tuberosum] | 0 |
| TrEMBL | A0A2N9HHY5 | Retrotran_gag_3 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39694 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology