Basic Information
Locus ID:
gene.Posoc05g03900
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 13383338 | 13388150 | - | gene.Posoc05g03900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 41,453.35 Da | 47.49 | 75.92 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 106 | 253 | 4.4E-21 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 100 | 356 | 8.02E-36 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 97 | 321 | 4.6E-25 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 106 | 380 | 10.179718 | IPR033121 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54400.1 | Eukaryotic aspartyl protease family protein. | 0 |
| RefSeq | XP_030961686.1 | aspartic proteinase CDR1-like [Quercus lobata] | 0 |
| Q9LS40 | Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana OX=3702 GN=ASPG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A834YH43 | Peptidase A1 domain-containing protein OS=Tetracentron sinense OX=13715 GN=HHK36_026572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000048996 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30283880 |
| Poaceae | Zea mays | 2 | Zm00001eb072250_P001, Zm00001eb172990_P001 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g14549 |
| Posidoniaceae | Posidonia oceanica | 18 | gene.Posoc01g16300, gene.Posoc01g29870, gene.Posoc01g36990 ... |