Basic Information
Locus ID:
gene.Posoc04g19300
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
CT11-RanBPM
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 324558321 | 324608444 | + | gene.Posoc04g19300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 42,847.25 Da | 32.19 | 76.73 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 214 | 328 | 9.9603E-27 | IPR033734 |
| CDD | cd09612 | Jacalin | 15 | 153 | 1.08128E-26 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 15 | 154 | 1.2E-17 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 209 | 329 | 6.2E-21 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 4 | 153 | 3.79E-26 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 192 | 329 | 7.72E-27 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 179 | 329 | 7.8E-33 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 1 | 154 | 4.8E-33 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 15 | 155 | 4.1E-17 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 206 | 330 | 2.6E-26 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 3 | 155 | 32.853279 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 192 | 330 | 31.352606 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 395 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 350 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_021667091.1 | jacalin-related lectin 3-like [Hevea brasiliensis] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9PIK3 | Jacalin-type lectin domain-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_24G00850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology