halophFGD

Basic Information

Locus ID: gene.Posoc04g15980

Species & Taxonomic ID: Posidonia oceanica & 55489

Genome Assembly: GCA_037176725.1

Description: EGF-like domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr04	238942171	238950188	-	gene.Posoc04g15980

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.70	36,978.33 Da	42.58	103.78	0.06

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03016	Exostosin family	17	125	3.8E-12	IPR040911
SUPERFAMILY	SSF50978	WD40 repeat-like	252	328	8.35E-12	IPR036322
Gene3D	G3DSA:2.130.10.10	-	244	333	4.6E-12	IPR015943
ProSiteProfiles	PS50082	Trp-Asp (WD) repeats profile.	305	333	9.171722	IPR001680
ProSiteProfiles	PS50294	Trp-Asp (WD) repeats circular profile.	305	333	9.09833	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K01939 (adenylosuccinate synthase [EC:6.3.4.4])

Pathway:

ko00230 (Purine metabolism) map00230 (Purine metabolism) ko00250 (Alanine, aspartate and glutamate metabolism) map00250 (Alanine, aspartate and glutamate metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways)

Module:

M00049 (Adenine ribonucleotide biosynthesis, IMP => ADP,ATP)

Reaction:

R01135 (GTP + IMP + L-Aspartate <=> GDP + Orthophosphate + N6-(1,2-Dicarboxyethyl)-AMP)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G57630.2	exostosin family protein.
RefSeq	XP_015578218.2	autophagy-related protein 18g isoform X2 [Ricinus communis]
Swiss-Prot	Q8GUL1	Autophagy-related protein 18g OS=Arabidopsis thaliana OX=3702 GN=ATG18G PE=2 SV=1
TrEMBL	A0A0K9NQV8	Exostosin family protein OS=Zostera marina OX=29655 GN=ZOSMA_6G00600 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg16106, jg35256, jg35257, jg8837, jg8838
Aizoaceae	Mesembryanthemum crystallinum	2	gene_12029, gene_6256
Amaranthaceae	Atriplex hortensis	1	Ah005828
Amaranthaceae	Beta vulgaris	2	BVRB_4g083240, BVRB_6g148330
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg16968, Sbi_jg61502
Amaranthaceae	Salicornia europaea	1	Seu_jg235
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00008300, GOSA_00008302, GOSA_00008303, GOSA_00008304
Amaranthaceae	Suaeda glauca	4	Sgl24693, Sgl24694, Sgl29848, Sgl29849
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000009908, gene:ENSEOMG00000029642 ... gene:ENSEOMG00000042761
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.4AG0008880, CQ.Regalona.r1.4BG0009000
Anacardiaceae	Pistacia vera	2	pistato.v30011370, pistato.v30086540
Apiaceae	Apium graveolens	2	Ag1G00445, Ag6G02951
Arecaceae	Cocos nucifera	2	COCNU_01G017340, scaffold006566G000130
Arecaceae	Phoenix dactylifera	2	gene-LOC103710951, gene-LOC103721033
Asparagaceae	Asparagus officinalis	1	AsparagusV1_07.929.V1.1
Asteraceae	Flaveria trinervia	2	Ftri10G23316, Ftri18G01868
Brassicaceae	Arabidopsis thaliana	2	AT1G03380.1, AT1G54710.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10006706m.g.v1.0, Thhalv10023243m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp1g02380.v2.2, SpUN0002_0210.v2.2
Brassicaceae	Brassica nigra	3	BniB04g018510.2N, BniB06g047430.2N, BniB07g044760.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq06G1639, Ceq06G2302
Casuarinaceae	Casuarina glauca	2	Cgl06G1699, Cgl06G2420
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno04g05160, gene.Cymno04g05170
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate06g16030
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-6291, nbisL1-mrna-7819
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG03.2369, evm.TU.LG04.236
Plantaginaceae	Plantago ovata	2	Pov_00008159, Pov_00024800
Plumbaginaceae	Limonium bicolor	1	Lb1G06863
Poaceae	Echinochloa crus-galli	3	AH05.2513, BH05.2592, CH05.2702
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_5AG0373620, gene-QOZ80_5BG0422650
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.1HG0062840.1
Poaceae	Lolium multiflorum	1	gene-QYE76_013323
Poaceae	Oryza coarctata	1	Oco10G009240
Poaceae	Oryza sativa	1	LOC_Os05g33610.1
Poaceae	Paspalum vaginatum	1	gene-BS78_09G140400
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0505196, Pt_Chr0506210
Poaceae	Sporobolus alterniflorus	4	Chr01G020790, Chr12G017210, Chr18G008920, Chr22G008730
Poaceae	Thinopyrum elongatum	1	Tel1E01G422000
Poaceae	Triticum dicoccoides	2	gene_TRIDC1AG037940, gene_TRIDC1BG043140
Poaceae	Triticum aestivum	3	TraesCS1A02G254200.1, TraesCS1B02G264000.2 ... TraesCS1D02G253700.1
Poaceae	Zea mays	2	Zm00001eb287690_P001, Zm00001eb349780_P001
Poaceae	Zoysia macrostachya	2	Zma_g26839, Zma_g28225
Portulacaceae	Portulaca oleracea	4	evm.TU.LG08.589, evm.TU.LG18.1193, evm.TU.LG20.688 ... evm.TU.LG22.1357
Posidoniaceae	Posidonia oceanica	5	gene.Posoc01g10850, gene.Posoc01g10860, gene.Posoc03g10700 ... gene.Posoc03g26920, gene.Posoc04g15980
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_1_RagTag.257, evm.TU.Scaffold_5_RagTag.929 ... evm.TU.Scaffold_9_RagTag.878
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-21345, nbisL1-mrna-7952
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-19924, nbisL1-mrna-4558, nbisL1-mrna-7719
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-18429, nbisL1-mrna-5317
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000003l.545, evm.TU.utg000006l.267 ... evm.TU.utg000012l.175
Rhizophoraceae	Kandelia obovata	3	Maker00009508, Maker00011195, Maker00013868
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-10026, nbisL1-mrna-1529, nbisL1-mrna-7785
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-230, nbisL1-mrna-5180, nbisL1-mrna-7549
Salicaceae	Populus euphratica	2	populus_peu13465, populus_peu15806
Solanaceae	Lycium barbarum	1	gene-LOC132645193
Solanaceae	Solanum chilense	1	SOLCI002883500
Solanaceae	Solanum pennellii	1	gene-LOC107007355
Tamaricaceae	Reaumuria soongarica	2	gene_12996, gene_16982
Tamaricaceae	Tamarix chinensis	2	TC05G2373, TC06G0795
Zosteraceae	Zostera marina	1	Zosma01g20390.v3.1