Basic Information
Locus ID:
gene.Posoc04g12500
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
clathrin assembly protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 132883945 | 132893972 | + | gene.Posoc04g12500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 35,802.19 Da | 60.75 | 73.83 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07651 | ANTH domain | 182 | 293 | 7.9E-36 | IPR011417 |
| SUPERFAMILY | SSF89009 | GAT-like domain | 181 | 293 | 1.45E-37 | - |
| Gene3D | G3DSA:1.25.40.90 | - | 128 | 176 | 2.1E-7 | IPR008942 |
| Gene3D | G3DSA:1.20.58.150 | ANTH domain | 178 | 300 | 4.5E-35 | IPR014712 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 85 | - | - |
| Coils | Coil | Coil | 20 | 40 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01600.1 | ENTH/ANTH/VHS superfamily protein. | 0 |
| RefSeq | XP_010924074.1 | putative clathrin assembly protein At2g01600 [Elaeis guineensis] | 0 |
| Q8LBH2 | Putative clathrin assembly protein At2g01600 OS=Arabidopsis thaliana OX=3702 GN=At2g01600 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6P5GB55 | putative clathrin assembly protein At2g01600 isoform X2 OS=Ananas comosus OX=4615 GN=LOC109722285 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g105470 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG21.853, evm.TU.LG26.828 |
| Posidoniaceae | Posidonia oceanica | 12 | gene.Posoc01g21050, gene.Posoc01g36390, gene.Posoc04g12350 ... |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00000459 |