Basic Information
Locus ID:
gene.Posoc04g12460
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Clathrin assembly protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 131770963 | 131774474 | - | gene.Posoc04g12460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.82 | 11,571.20 Da | 51.64 | 76.24 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07651 | ANTH domain | 26 | 70 | 2.1E-9 | IPR011417 |
| SUPERFAMILY | SSF89009 | GAT-like domain | 30 | 70 | 1.65E-7 | - |
| Gene3D | G3DSA:1.20.58.150 | ANTH domain | 24 | 72 | 4.2E-6 | IPR014712 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 101 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01600.1 | ENTH/ANTH/VHS superfamily protein. | 0 |
| RefSeq | XP_020105861.1 | putative clathrin assembly protein At2g01600 isoform X2 [Ananas comosus] | 0 |
| Q8LBH2 | Putative clathrin assembly protein At2g01600 OS=Arabidopsis thaliana OX=3702 GN=At2g01600 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453FAV8 | ANTH domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g105470 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG21.853, evm.TU.LG26.828 |
| Posidoniaceae | Posidonia oceanica | 12 | gene.Posoc01g21050, gene.Posoc01g36390, gene.Posoc04g12350 ... |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00000459 |