Basic Information
Locus ID:
gene.Posoc04g11440
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 100434530 | 100435336 | - | gene.Posoc04g11440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 30,125.69 Da | 45.30 | 100.78 | 0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13445 | RING-type zinc-finger | 48 | 77 | 2.1E-8 | IPR027370 |
| SUPERFAMILY | SSF57850 | RING/U-box | 40 | 106 | 2.83E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 38 | 141 | 1.5E-12 | IPR013083 |
| SMART | SM00184 | ring_2 | 48 | 102 | 0.0078 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 48 | 103 | 10.350093 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 67 | 76 | - | IPR017907 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G29270.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_039158057.1 | uncharacterized protein LOC104419394 [Eucalyptus grandis] | 0 |
| TrEMBL | A0A1U7ZWV0 | uncharacterized protein LOC104598542 OS=Nelumbo nucifera OX=4432 GN=LOC104598542 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology