Basic Information
Locus ID:
gene.Posoc04g08350
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 52401236 | 52427282 | + | gene.Posoc04g08350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.85 | 54,895.04 Da | 48.01 | 78.52 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14132 | STKc_CK2_alpha | 156 | 460 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 175 | 460 | 2.3E-66 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 148 | 464 | 5.6E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 166 | 224 | 5.8E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 228 | 251 | 5.1E-110 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 252 | 461 | 5.1E-110 | - |
| SMART | SM00220 | serkin_6 | 175 | 460 | 5.8E-75 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 175 | 460 | 43.014721 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 181 | 204 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 288 | 300 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 453 | 474 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 99 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 122 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko03008 (Ribosome biogenesis in eukaryotes)
map03008 (Ribosome biogenesis in eukaryotes)
map04064 (NF-kappa B signaling pathway)
ko04137 (Mitophagy - animal)
map04137 (Mitophagy - animal)
ko04139 (Mitophagy - yeast)
map04139 (Mitophagy - yeast)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04520 (Adherens junction)
map04520 (Adherens junction)
ko04712 (Circadian rhythm - plant)
map04712 (Circadian rhythm - plant)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23070.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_027078569.1 | casein kinase II subunit alpha-like [Coffea arabica] | 0 |
| O64816 | Casein kinase II subunit alpha-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CKA4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6P6TJ86 | casein kinase II subunit alpha-like OS=Coffea arabica OX=13443 GN=LOC113701884 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology