Basic Information
Locus ID:
gene.Posoc04g05020
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
calcium-binding protein CML14
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 21000641 | 21001135 | - | gene.Posoc04g05020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.53 | 18,136.39 Da | 49.49 | 90.43 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 90 | 151 | 4.02709E-19 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 89 | 151 | 1.8E-16 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 14 | 75 | 1.3E-11 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 9 | 151 | 1.83E-40 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 1 | 155 | 2.0E-44 | - |
| SMART | SM00054 | efh_1 | 90 | 118 | 9.4E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 51 | 79 | 0.83 | IPR002048 |
| SMART | SM00054 | efh_1 | 126 | 154 | 8.3E-8 | IPR002048 |
| SMART | SM00054 | efh_1 | 15 | 43 | 0.0073 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 122 | 157 | 13.732334 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 11 | 46 | 13.369694 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 86 | 121 | 14.90394 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 47 | 82 | 10.245409 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 60 | 72 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 24 | 36 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 135 | 147 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 99 | 111 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_038706566.1 | probable calcium-binding protein CML16 [Tripterygium wilfordii] | 0 |
| Q6L5F4 | Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A843VAR7 | Calmodulin OS=Colocasia esculenta OX=4460 GN=Taro_023430 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology