Basic Information
Locus ID:
gene.Posoc04g01700
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
MAC/Perforin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 4967470 | 4978025 | + | gene.Posoc04g01700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.64 | 29,963.74 Da | 50.66 | 84.19 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | Coil | Coil | 6 | 26 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20790.1 | NAD(P)-binding Rossmann-fold superfamily protein. | 0 |
| RefSeq | XP_016185269.1 | MACPF domain-containing protein At4g24290-like isoform X1 [Arachis ipaensis] | 0 |
| Q8L612 | MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana OX=3702 GN=At1g14780 PE=2 SV=1 | 0 | |
| TrEMBL | A0A843THX4 | MACPF domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_001003 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000041905 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno09g09490 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00000426 |
| Posidoniaceae | Posidonia oceanica | 15 | gene.Posoc01g27490, gene.Posoc02g07800, gene.Posoc03g08260 ... |
| Tamaricaceae | Tamarix chinensis | 1 | TC02G3783 |