Basic Information
Locus ID:
gene.Posoc04g00790
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 2476163 | 2476738 | - | gene.Posoc04g00790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.88 | 19,084.41 Da | 25.74 | 85.03 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 100 | 155 | 1.06741E-12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 34 | 84 | 3.9E-8 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 100 | 154 | 3.4E-10 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 34 | 156 | 6.21E-28 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 32 | 93 | 7.8E-12 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 99 | 164 | 3.2E-17 | - |
| SMART | SM00054 | efh_1 | 60 | 88 | 0.0032 | IPR002048 |
| SMART | SM00054 | efh_1 | 129 | 157 | 9.6E-7 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 125 | 160 | 13.258112 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 56 | 91 | 10.580154 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 69 | 81 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03000.1 | EF hand calcium-binding protein family. Calmodulin like protein localized in the plant vacuolar compartment with a function of binding and modifying the activity of a tonoplast transporter (AtNHX1) from within the vacuole in a Ca+2- and pH-dependent manner | 0 |
| RefSeq | XP_010919971.1 | probable calcium-binding protein CML18 [Elaeis guineensis] | 0 |
| Q9AWK2 | Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 GN=CML11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9R5G4 | probable calcium-binding protein CML18 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105043942 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology