Basic Information
Locus ID:
gene.Posoc03g25410
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Short Name:
EBF1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 413461542 | 413463676 | + | gene.Posoc03g25410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 69,406.14 Da | 43.36 | 106.43 | 0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 224 | 247 | 1.1 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 183 | 431 | 1.04E-25 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 63 | 109 | 3.4E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 357 | 599 | 2.88E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 458 | 657 | 3.8E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 262 | 3.5E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 263 | 457 | 8.7E-34 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 224 | 249 | 1.8E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 387 | 412 | 6.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 493 | 518 | 52.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 599 | 624 | 8.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 573 | 597 | 360.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 547 | 572 | 6.9 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 413 | 438 | 380.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 361 | 386 | 0.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 520 | 545 | 180.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 250 | 275 | 0.0028 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 198 | 223 | 5.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 276 | 301 | 0.0072 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 467 | 492 | 7.9 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_042973408.1 | EIN3-binding F-box protein 1-like [Carya illinoinensis] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9GH54 | F-box domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26747 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology