Basic Information
Locus ID:
gene.Posoc03g24490
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Short Name:
IAA15
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 403777295 | 403780704 | + | gene.Posoc03g24490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 32,919.67 Da | 50.68 | 58.34 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 81 | 284 | 3.2E-56 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 175 | 276 | 1.08E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 179 | 288 | 2.1E-41 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 185 | 277 | 23.181881 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 131 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04250.1 | AUX/IAA transcriptional regulator family protein. Transcription regulator acting as repressor of auxin-inducible gene expression. Auxin-inducible AUX/IAA gene. Short-lived nuclear protein with four conserved domains. Domain III has homology to beta alpha alpha dimerization and DNA binding domains. Involved in auxin signaling. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components. | 0 |
| RefSeq | XP_038974668.1 | auxin-responsive protein IAA1-like [Phoenix dactylifera] | 0 |
| Q5VRD1 | Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1D1XVR2 | Auxin-responsive protein OS=Anthurium amnicola OX=1678845 GN=IAA16_0 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology