Basic Information
Locus ID:
gene.Posoc03g22130
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Ribonuclease H protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 372163007 | 372164422 | + | gene.Posoc03g22130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 51,527.33 Da | 42.87 | 68.15 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14111 | Domain of unknown function (DUF4283) | 1 | 66 | 2.2E-7 | IPR025558 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 172 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 150 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_027155307.1 | uncharacterized protein LOC113755505 [Coffea eugenioides] | 0 |
| TrEMBL | A0A328EAB1 | DUF4283 domain-containing protein OS=Cuscuta australis OX=267555 GN=DM860_017621 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Posidoniaceae | Posidonia oceanica | 23 | gene.Posoc01g21990, gene.Posoc01g31420, gene.Posoc02g06000 ... |