Basic Information
Locus ID:
gene.Posoc03g21260
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 349309568 | 349311631 | + | gene.Posoc03g21260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 73,976.72 Da | 40.39 | 100.35 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 551 | 607 | 3.3E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 465 | 514 | 2.3E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 69 | 1.1E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 196 | 256 | 1.9E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 366 | 387 | 0.46 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 103 | 117 | 1.5 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 269 | 291 | 0.81 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 56 | 332 | 6.46E-45 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 248 | 638 | 3.45E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 362 | 664 | 6.1E-76 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 74 | 361 | 5.7E-70 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 594 | 618 | 8.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 219 | 242 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 100 | 124 | 6.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 339 | 363 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 487 | 511 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 570 | 593 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 387 | 410 | 56.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 570 | 593 | 190.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 594 | 620 | 42.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 487 | 510 | 760.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 363 | 389 | 490.0 | - |
| SMART | SM00369 | LRR_typ_2 | 291 | 315 | 330.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 243 | 269 | 34.0 | - |
| SMART | SM00369 | LRR_typ_2 | 243 | 266 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 267 | 290 | 12.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 596 | 619 | 7.427029 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 594 | 607 | 3.7E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 103 | 116 | 3.7E-6 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17250.1 | receptor like protein 3. | 0 |
| RefSeq | XP_010935436.1 | phytosulfokine receptor 1-like [Elaeis guineensis] | 0 |
| Q9SHI4 | Receptor-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RLP3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0N7H9 | Phytosulfokine receptor 1-like OS=Cocos nucifera OX=13894 GN=COCNU_09G006060 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0099290, gene-QOZ80_2BG0152720 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0546030.1.CDS1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_019570, gene-QYE76_019571 |
| Poaceae | Oryza coarctata | 2 | Oco03G000770, Oco04G000710 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g02490.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G012100 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0201128 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G117700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG005390, gene_TRIDC6BG007810 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G044700.1.cds1, TraesCS6B02G061000.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb229960_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-52092 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g12066 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g21260 |