Basic Information
Locus ID:
gene.Posoc03g18930
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
calcium-binding protein CML14
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 246633336 | 246633818 | - | gene.Posoc03g18930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.63 | 17,423.80 Da | 37.41 | 89.75 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 86 | 148 | 8.00494E-19 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 85 | 147 | 3.6E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 10 | 72 | 4.9E-9 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 6 | 148 | 2.29E-37 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 1 | 81 | 2.9E-15 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 82 | 154 | 1.2E-22 | - |
| SMART | SM00054 | efh_1 | 122 | 150 | 4.8E-8 | IPR002048 |
| SMART | SM00054 | efh_1 | 47 | 75 | 4.8 | IPR002048 |
| SMART | SM00054 | efh_1 | 86 | 114 | 9.4E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 11 | 39 | 0.0034 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 7 | 42 | 13.983393 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 118 | 153 | 13.397589 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 82 | 117 | 14.624987 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 43 | 78 | 8.320626 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 95 | 107 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 131 | 143 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 56 | 68 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 20 | 32 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_008800887.1 | probable calcium-binding protein CML14 [Phoenix dactylifera] | 0 |
| Q6L5F4 | Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9NU04 | Putative calcium-binding protein CML16 OS=Zostera marina OX=29655 GN=ZOSMA_68G00270 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology