HalophFGD

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Basic Information
Locus ID: gene.Posoc03g18720
Species & Taxonomic ID: Posidonia oceanica & 55489
Genome Assembly: GCA_037176725.1
Description: 5' nucleotidase family
Maps and Mapping Data
Chromosome Start End Strand ID
Chr03 242195009 242195969 - gene.Posoc03g18720
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.46 20,976.67 Da 63.15 81.24 -0.39
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF05761 5' nucleotidase family 112 183 1.1E-27 IPR008380
SUPERFAMILY SSF56784 HAD-like 108 185 7.66E-23 IPR036412
MobiDBLite mobidb-lite consensus disorder prediction 13 45 - -
Coils Coil Coil 73 93 - -
Best hit
Source Best Hit ID Description E-value
TAIR AT2G23890.1 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase. 0
RefSeq XP_020082881.1 5'-nucleotidase domain-containing protein DDB_G0275467 isoform X3 [Ananas comosus] 0
Swiss-Prot Q75K12 5'-nucleotidase domain-containing protein DDB_G0275467 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0275467 PE=3 SV=1 0
TrEMBL A0A0K9P3P0 Nucleotidase-like protein OS=Zostera marina OX=29655 GN=ZOSMA_43G00320 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Arecaceae Phoenix dactylifera 1 gene-LOC113461393
Poaceae Oryza coarctata 1 Oco18G005310
Poaceae Paspalum vaginatum 2 gene-BS78_K069800, gene-BS78_K248600
Posidoniaceae Posidonia oceanica 4 gene.Posoc03g18720, gene.Posoc06g07640, gene.Posoc06g08500 ...
gene.Posoc07g07980
Tamaricaceae Tamarix chinensis 1 TC02G2359
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.