HalophFGD

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Basic Information
Locus ID: gene.Posoc03g16320
Species & Taxonomic ID: Posidonia oceanica & 55489
Genome Assembly: GCA_037176725.1
Description: Aminotransferase
Maps and Mapping Data
Chromosome Start End Strand ID
Chr03 196731628 196732874 + gene.Posoc03g16320
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.01 31,768.51 Da 71.89 94.30 0.10
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF53383 PLP-dependent transferases 232 296 1.43E-8 IPR015424
Gene3D G3DSA:3.40.640.10 - 233 298 2.9E-8 IPR015421
MobiDBLite mobidb-lite consensus disorder prediction 27 58 - -
MobiDBLite mobidb-lite consensus disorder prediction 34 58 - -
Gene Ontology
Molecular Function:
GO:0003824 (catalytic activity)
KEGG Pathway
KO Term:
K00815 (tyrosine aminotransferase [EC:2.6.1.5])
Pathway:
ko00130 (Ubiquinone and other terpenoid-quinone biosynthesis) map00130 (Ubiquinone and other terpenoid-quinone biosynthesis) ko00270 (Cysteine and methionine metabolism) map00270 (Cysteine and methionine metabolism) ko00350 (Tyrosine metabolism) map00350 (Tyrosine metabolism) ko00360 (Phenylalanine metabolism) map00360 (Phenylalanine metabolism) ko00400 (Phenylalanine, tyrosine and tryptophan biosynthesis) map00400 (Phenylalanine, tyrosine and tryptophan biosynthesis) ko00401 (Novobiocin biosynthesis) map00401 (Novobiocin biosynthesis) ko00950 (Isoquinoline alkaloid biosynthesis) map00950 (Isoquinoline alkaloid biosynthesis) ko00960 (Tropane, piperidine and pyridine alkaloid biosynthesis) map00960 (Tropane, piperidine and pyridine alkaloid biosynthesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko01230 (Biosynthesis of amino acids) map01230 (Biosynthesis of amino acids)
Module:
M00025 (Tyrosine biosynthesis, chorismate => HPP => tyrosine) M00034 (Methionine salvage pathway)
Reaction:
R00694 (L-Phenylalanine + 2-Oxoglutarate <=> Phenylpyruvate + L-Glutamate) R00734 (L-Tyrosine + 2-Oxoglutarate <=> 3-(4-Hydroxyphenyl)pyruvate + L-Glutamate) R07396 (4-Methylthio-2-oxobutanoic acid + L-Glutamate <=> L-Methionine + 2-Oxoglutarate)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G53970.1 Tyrosine transaminase family protein. encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment 0
RefSeq XP_022877235.1 tyrosine aminotransferase-like [Olea europaea var. sylvestris] 0
Swiss-Prot Q9FN30 Probable aminotransferase TAT2 OS=Arabidopsis thaliana OX=3702 GN=At5g53970 PE=2 SV=1 0
TrEMBL A0A8S0RQA6 Tyrosine aminotransferase-like OS=Olea europaea subsp. europaea OX=158383 GN=OLEA9_A108364 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Asparagaceae Asparagus officinalis 2 AsparagusV1_03.3046.V1.1, AsparagusV1_03.3048.V1.1
Brassicaceae Brassica nigra 1 BniB04g013020.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq05G1488
Casuarinaceae Casuarina glauca 1 Cgl05G1478
Poaceae Zoysia japonica 1 nbis-gene-15456
Poaceae Zoysia macrostachya 1 Zma_g23658
Posidoniaceae Posidonia oceanica 1 gene.Posoc03g16320
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.