Basic Information
Locus ID:
gene.Posoc03g16080
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 193187829 | 193211580 | - | gene.Posoc03g16080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.72 | 100,501.20 Da | 45.44 | 86.32 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 621 | 885 | 6.3E-40 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 249 | 285 | 4.1E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 338 | 393 | 7.1E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 248 | 455 | 1.3E-36 | - |
| SUPERFAMILY | SSF55961 | Bet v1-like | 108 | 248 | 1.37E-19 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 600 | 885 | 2.35E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 581 | 694 | 1.4E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 476 | 2.6E-37 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 695 | 898 | 1.2E-50 | - |
| Gene3D | G3DSA:3.30.530.20 | - | 88 | 267 | 8.3E-24 | IPR023393 |
| SMART | SM00220 | serkin_6 | 618 | 886 | 4.6E-27 | IPR000719 |
| ProSiteProfiles | PS50848 | START domain profile. | 112 | 249 | 16.321341 | IPR002913 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 17 | 5.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 618 | 894 | 34.944206 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 477 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 488 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78980.1 | STRUBBELIG-receptor family 5. | 0 |
| RefSeq | XP_043710998.1 | protein STRUBBELIG-RECEPTOR FAMILY 5-like isoform X1 [Telopea speciosissima] | 0 |
| Q6R2K1 | Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835M7I5 | START domain-containing protein OS=Coptis chinensis OX=261450 GN=IFM89_030783 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology