Basic Information
Locus ID:
gene.Posoc03g15460
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 188122287 | 188128445 | - | gene.Posoc03g15460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 43,563.78 Da | 53.22 | 94.42 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 118 | 166 | 5.41403E-17 | - |
| Pfam | PF12906 | RING-variant domain | 118 | 165 | 3.4E-10 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 114 | 169 | 4.5E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 102 | 177 | 2.6E-16 | IPR013083 |
| SMART | SM00744 | ringv_2 | 117 | 166 | 1.2E-13 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 110 | 172 | 20.136959 | IPR011016 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50440.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_029121616.1 | E3 ubiquitin-protein ligase MARCH8 isoform X2 [Elaeis guineensis] | 0 |
| TrEMBL | A0A0K9Q3C2 | E3 ubiquitin-protein ligase MARCH2 OS=Zostera marina OX=29655 GN=ZOSMA_11G00380 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology