Basic Information
Locus ID:
gene.Posoc03g11420
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 127672862 | 127673793 | + | gene.Posoc03g11420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.19 | 25,261.89 Da | 48.60 | 66.81 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 26 | 149 | 1.18596E-25 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 40 | 151 | 6.9E-14 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 14 | 150 | 5.23E-27 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 9 | 152 | 1.1E-33 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 26 | 153 | 4.0E-9 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 14 | 153 | 26.109632 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 223 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05760.1 | Mannose-binding lectin superfamily protein. Specifically restrict the long-distance movement of tobacco etch potyvirus (TEV) without involving either hypersensitive cell death or systemic acquired resistance | 0 |
| RefSeq | XP_008782840.1 | jacalin-related lectin 3-like [Phoenix dactylifera] | 0 |
| D9UBG0 | Inactive protein RESTRICTED TEV MOVEMENT 1 OS=Arabidopsis thaliana OX=3702 GN=RTM1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0K9NV11 | Jacalin-type lectin domain-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_64G00250 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology