Basic Information
Locus ID:
gene.Posoc03g09140
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 81898963 | 81899805 | - | gene.Posoc03g09140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 32,391.69 Da | 45.15 | 81.43 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 230 | 273 | 2.47766E-14 | - |
| Pfam | PF13639 | Ring finger domain | 230 | 273 | 1.2E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 224 | 277 | 3.31E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 219 | 279 | 5.1E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 230 | 272 | 3.8E-9 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 230 | 273 | 12.887609 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021839255.1 | E3 ubiquitin-protein ligase RNF126-B-like [Spinacia oleracea] | 0 |
| TrEMBL | A0A7J6VAY7 | RING-type domain-containing protein OS=Thalictrum thalictroides OX=46969 GN=FRX31_028159 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene.Posoc03g09140.