Basic Information
Locus ID:
gene.Posoc03g08310
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 68703102 | 68705101 | + | gene.Posoc03g08310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 43,752.72 Da | 26.64 | 97.11 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 201 | 331 | 2.6E-14 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 39 | 110 | 1.5E-6 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 194 | 331 | 6.15E-18 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 33 | 146 | 4.05E-15 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 25 | 169 | 1.8E-9 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 174 | 332 | 1.4E-11 | IPR036378 |
| SMART | SM00554 | fasc_3 | 227 | 332 | 1.0E-15 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 188 | 329 | 13.435093 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 27 | 175 | 11.208603 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 382 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55730.1 | FASCICLIN-like arabinogalactan 1. fasciclin-like arabinogalactan-protein 1 (Fla1) | 0 |
| RefSeq | XP_010943291.1 | fasciclin-like arabinogalactan protein 2 [Elaeis guineensis] | 0 |
| Q9FM65 | Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NKP2 | Fasciclin-like arabinogalactan protein 10 OS=Zostera marina OX=29655 GN=ZOSMA_93G00910 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology