Basic Information
Locus ID:
gene.Posoc03g06620
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Short Name:
WRKY4
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 52833128 | 52871278 | + | gene.Posoc03g06620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 55,016.65 Da | 48.70 | 50.06 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 392 | 449 | 6.1E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 217 | 273 | 1.3E-26 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 383 | 451 | 3.79E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 214 | 275 | 1.31E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 201 | 276 | 8.3E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 376 | 452 | 3.1E-35 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 391 | 450 | 1.3E-38 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 216 | 274 | 7.5E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 386 | 451 | 37.91795 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 217 | 275 | 23.410515 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 358 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 212 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_038983447.1 | probable WRKY transcription factor 4 [Phoenix dactylifera] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5B7AE91 | Putative DNA binding protein WRKY2 OS=Davidia involucrata OX=16924 GN=Din_023689 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology