Basic Information
Locus ID:
gene.Posoc03g02670
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Ankyrin repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 14845660 | 14847999 | - | gene.Posoc03g02670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 32,753.91 Da | 45.95 | 89.36 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 1 | 104 | 6.4E-12 | IPR020683 |
| Pfam | PF04762 | IKI3 family | 147 | 233 | 2.0E-12 | IPR006849 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 1 | 115 | 4.15E-16 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 1 | 137 | 2.0E-17 | IPR036770 |
| SMART | SM00248 | ANK_2a | 80 | 109 | 1.6E-4 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 80 | 104 | 11.293642 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 80 | 112 | 12.02167 | IPR002110 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57740.1 | XB3 ortholog 2 in Arabidopsis thaliana. ubiquitin ligase | 0 |
| RefSeq | XP_039131306.1 | probable E3 ubiquitin-protein ligase XBOS32 [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q6KAE5 | Probable E3 ubiquitin-protein ligase XBOS32 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS32 PE=2 SV=2 | 0 | |
| TrEMBL | A0A200QZ73 | Ankyrin repeat OS=Macleaya cordata OX=56857 GN=BVC80_1829g21 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology