Basic Information
Locus ID:
gene.Posoc03g00280
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 3332204 | 3337158 | + | gene.Posoc03g00280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.35 | 49,258.61 Da | 49.05 | 60.09 | -0.90 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 239 | 320 | 8.8E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 405 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 203 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 405 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 236 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 131 | - | - |
| Coils | Coil | Coil | 251 | 271 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_010917924.1 | protein WVD2-like 4 [Elaeis guineensis] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9Q4B2 | TPX2 domain-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_116G00330 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology