Basic Information
Locus ID:
gene.Posoc03g00190
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 3000825 | 3019675 | + | gene.Posoc03g00190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 103,876.17 Da | 50.64 | 80.00 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 763 | 909 | 3.70601E-52 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 313 | 908 | 1.2E-80 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 311 | 911 | 3.92E-108 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 663 | 918 | 2.5E-56 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 299 | 543 | 5.3E-65 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 313 | 911 | 56.139622 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 314 | 329 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 853 | 870 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 50 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_020266514.1 | ubiquitin carboxyl-terminal hydrolase 8 [Asparagus officinalis] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9NMX9 | Ubiquitin carboxyl-terminal hydrolase OS=Zostera marina OX=29655 GN=ZOSMA_87G00970 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology