Basic Information
Locus ID:
gene.Posoc02g33070
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 459394960 | 459399446 | + | gene.Posoc02g33070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 44,498.29 Da | 42.00 | 78.17 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 39 | 282 | 1.34E-31 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 30 | 309 | 5.6E-19 | IPR015943 |
| SMART | SM00320 | WD40_4 | 240 | 281 | 0.15 | IPR001680 |
| SMART | SM00320 | WD40_4 | 26 | 63 | 74.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 197 | 237 | 0.039 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56440.1 | homolog of yeast autophagy 18 (ATG18) D. | 0 |
| RefSeq | XP_019706260.1 | autophagy-related protein 18c isoform X1 [Elaeis guineensis] | 0 |
| Q0WPK3 | Autophagy-related protein 18d OS=Arabidopsis thaliana OX=3702 GN=ATG18D PE=2 SV=1 | 0 | |
| TrEMBL | A0A6J0PI79 | autophagy-related protein 18c isoform X1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105044863 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology