Basic Information
Locus ID:
gene.Posoc02g30760
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 438119564 | 438120721 | + | gene.Posoc02g30760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 30,732.07 Da | 66.63 | 60.40 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16667 | RING-H2_RNF126_like | 172 | 214 | 1.46311E-25 | - |
| Pfam | PF14369 | zinc-ribbon | 20 | 53 | 5.3E-9 | IPR039525 |
| Pfam | PF13639 | Ring finger domain | 172 | 214 | 8.1E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 155 | 218 | 4.42E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 135 | 220 | 7.8E-23 | IPR013083 |
| SMART | SM00184 | ring_2 | 173 | 213 | 1.8E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 173 | 214 | 12.371254 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 241 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56580.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_009409315.1 | PREDICTED: probable E3 ubiquitin-protein ligase RHC1A isoform X2 [Musa acuminata subsp. malaccensis] | 0 |
| Q94AK4 | E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9Q6D7 | RING-type E3 ubiquitin transferase OS=Zostera marina OX=29655 GN=ZOSMA_102G00250 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology