Basic Information
Locus ID:
gene.Posoc02g29200
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Short Name:
SERK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 423196194 | 423201997 | - | gene.Posoc02g29200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 69,446.73 Da | 40.00 | 95.97 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 309 | 580 | 2.0E-42 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 172 | 188 | 1.7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 99 | 121 | 1.5 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 71 | 3.1E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 203 | 3.74E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 287 | 583 | 3.14E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 277 | 384 | 5.2E-40 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 385 | 602 | 1.2E-68 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 217 | 2.9E-62 | IPR032675 |
| SMART | SM00220 | serkin_6 | 308 | 582 | 6.8E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 145 | 168 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 169 | 192 | 9.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 121 | 19.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 308 | 595 | 35.382362 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 314 | 336 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 431 | 443 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71830.1 | somatic embryogenesis receptor-like kinase 1. Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. later | 0 |
| RefSeq | XP_020081964.1 | somatic embryogenesis receptor kinase 2-like [Ananas comosus] | 0 |
| B8BB68 | LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=1 | 0 | |
| TrEMBL | H6SU43 | Somatic embryogenesis receptor-like kinase OS=Ananas comosus OX=4615 GN=SERK1 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology