Basic Information
Locus ID:
gene.Posoc02g29000
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
gag-polypeptide of LTR copia-type
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 420716574 | 420720326 | + | gene.Posoc02g29000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.61 | 22,455.61 Da | 59.51 | 52.09 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 36 | 74 | 1.72E-5 | IPR036875 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 166 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_012842058.1 | PREDICTED: uncharacterized protein LOC105962301 isoform X2 [Erythranthe guttata] | 0 |
| TrEMBL | A0A2N9E542 | Retrotran_gag_3 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1959 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology