Basic Information
Locus ID:
gene.Posoc02g27960
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 406951699 | 406973875 | + | gene.Posoc02g27960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 104,209.14 Da | 56.25 | 87.66 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 341 | 381 | 2.08882E-14 | - |
| CDD | cd11299 | O-FucT_plant | 538 | 862 | 2.00648E-150 | IPR024709 |
| Pfam | PF17123 | RING-like zinc finger | 342 | 370 | 7.5E-10 | IPR001841 |
| Pfam | PF10250 | GDP-fucose protein O-fucosyltransferase | 538 | 857 | 7.8E-75 | IPR019378 |
| SUPERFAMILY | SSF57850 | RING/U-box | 329 | 381 | 3.28E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 306 | 385 | 3.1E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 342 | 383 | 6.7E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 342 | 381 | 10.114045 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 432 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 36 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G14020.1 | O-fucosyltransferase family protein. | 0 |
| RefSeq | XP_052200143.1 | rhamnogalacturonan I rhamnosyltransferase 1 [Diospyros lotus] | 0 |
| Q6NQ51 | Rhamnogalacturonan I rhamnosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RRT4 PE=1 SV=1 | 0 | |
| TrEMBL | W1NHA8 | O-fucosyltransferase family protein OS=Amborella trichopoda OX=13333 GN=AMTR_s00010p00267640 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology