Basic Information
Locus ID:
gene.Posoc02g24140
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
AT hook motif family protein, expressed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 366382388 | 366392393 | + | gene.Posoc02g24140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.92 | 94,128.38 Da | 52.08 | 62.69 | -0.95 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 65 | 273 | 3.26E-7 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 575 | 620 | 1.73E-5 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 574 | 622 | 5.4E-8 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 391 | 410 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 434 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 759 | 787 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 629 | 862 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 646 | 688 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 350 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 756 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 833 | 848 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 811 | 832 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 281 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_029122100.1 | uncharacterized protein LOC105050720 [Elaeis guineensis] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A8N4IF86 | uncharacterized protein LOC105050720 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105050720 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology