Basic Information
Locus ID:
gene.Posoc02g22990
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Glycerophosphoryl diester phosphodiesterase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 351613750 | 351663886 | + | gene.Posoc02g22990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 81,680.92 Da | 31.00 | 95.83 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 360 | 651 | 2.5E-42 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 354 | 651 | 1.96E-45 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 43 | 338 | 2.88E-32 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 355 | 654 | 5.0E-50 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 41 | 340 | 2.0E-24 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 355 | 657 | 33.038315 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 43 | 340 | 23.229235 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55480.1 | SHV3-like 1. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_010928867.1 | glycerophosphodiester phosphodiesterase GDPDL3 [Elaeis guineensis] | 0 |
| Q9FJ62 | Glycerophosphodiester phosphodiesterase GDPDL4 OS=Arabidopsis thaliana OX=3702 GN=GDPDL4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0MUT6 | glycerophosphodiester phosphodiesterase OS=Cocos nucifera OX=13894 GN=COCNU_01G007040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology