Basic Information
Locus ID:
gene.Posoc02g19520
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 313121757 | 313122998 | - | gene.Posoc02g19520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 42,510.34 Da | 45.54 | 101.21 | 0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 190 | 320 | 7.2E-18 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 178 | 321 | 1.02E-21 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 25 | 129 | 2.49E-10 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 172 | 320 | 1.0E-15 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 20 | 158 | 1.7E-5 | IPR036378 |
| SMART | SM00554 | fasc_3 | 216 | 321 | 3.4E-16 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 178 | 318 | 16.212465 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 388 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60900.1 | FASCICLIN-like arabinogalactan-protein 10. | 0 |
| RefSeq | XP_010919185.1 | fasciclin-like arabinogalactan protein 8 [Elaeis guineensis] | 0 |
| Q9LZX4 | Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana OX=3702 GN=FLA10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A843UFG4 | FAS1 domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_014626 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology