HalophFGD

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Basic Information
Locus ID: gene.Posoc02g16850
Species & Taxonomic ID: Posidonia oceanica & 55489
Genome Assembly: GCA_037176725.1
Description: F-box protein At5g49610-like
Maps and Mapping Data
Chromosome Start End Strand ID
Chr02 279717616 279718710 - gene.Posoc02g16850
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.27 40,996.08 Da 46.19 85.63 -0.04
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 2 24 1.7E-4 IPR001810
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 110 320 2.3E-16 IPR017451
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_010936496.1 uncharacterized protein LOC105056120 [Elaeis guineensis] 0
TrEMBL A0A8K0I7I7 Putative F-box protein OS=Cocos nucifera OX=13894 GN=COCNU_05G001860 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Arecaceae Cocos nucifera 2 COCNU_05G001850, COCNU_05G001860
Arecaceae Phoenix dactylifera 1 gene-LOC103716347
Hydrocharitaceae Thalassia testudinum 3 gene.Thate05g23740, gene.Thate05g29380, gene.Thate07g07020
Posidoniaceae Posidonia oceanica 11 gene.Posoc02g16770, gene.Posoc02g16780, gene.Posoc02g16800 ...
gene.Posoc02g16810, gene.Posoc02g16820, gene.Posoc02g16830, gene.Posoc02g16840, gene.Posoc02g16850, gene.Posoc03g15790, gene.Posoc05g04330, gene.Posoc10g05900
Zosteraceae Zostera marina 9 Zosma05g13040.v3.1, Zosma05g13280.v3.1, Zosma05g15120.v3.1 ...
Zosma05g16390.v3.1, Zosma05g16420.v3.1, Zosma05g16440.v3.1, Zosma05g16450.v3.1, Zosma05g24840.v3.1, Zosma798g00010.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.