Basic Information
Locus ID:
gene.Posoc02g13730
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 236557154 | 236581022 | + | gene.Posoc02g13730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 93,516.06 Da | 75.75 | 68.74 | -0.96 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 654 | 693 | 3.43668E-20 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 652 | 696 | 3.2E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 653 | 698 | 1.49E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 627 | 699 | 7.1E-12 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 654 | 693 | 10.748424 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 792 | 818 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 623 | 642 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 132 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 802 | 818 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 150 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 102 | - | - |
| Coils | Coil | Coil | 583 | 603 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_038979588.1 | uncharacterized protein LOC103716994 [Phoenix dactylifera] | 0 |
| TrEMBL | A0A8B9A6T1 | uncharacterized protein LOC103716994 OS=Phoenix dactylifera OX=42345 GN=LOC103716994 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology