Basic Information
Locus ID:
gene.Posoc02g12220
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
high mobility group
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 210685524 | 210691181 | + | gene.Posoc02g12220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.45 | 30,126.11 Da | 74.19 | 78.12 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01388 | ARID/BRIGHT DNA binding domain | 153 | 217 | 6.0E-10 | IPR001606 |
| SUPERFAMILY | SSF46774 | ARID-like | 135 | 221 | 2.22E-16 | IPR036431 |
| Gene3D | G3DSA:1.10.150.60 | - | 131 | 223 | 7.3E-16 | IPR036431 |
| SMART | SM01014 | ARID_2 | 143 | 223 | 7.1E-9 | - |
| SMART | SM00501 | bright_3 | 147 | 228 | 1.2E-12 | IPR001606 |
| ProSiteProfiles | PS51011 | ARID domain profile. | 146 | 237 | 16.689905 | IPR001606 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04880.1 | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain. | 0 |
| RefSeq | XP_008778105.1 | high mobility group B protein 15-like isoform X2 [Phoenix dactylifera] | 0 |
| Q9MAT6 | High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7BJ30 | high mobility group B protein 15-like isoform X2 OS=Phoenix dactylifera OX=42345 GN=LOC103697941 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology