Basic Information
Locus ID:
gene.Posoc02g11890
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 202464674 | 202466071 | - | gene.Posoc02g11890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 50,540.82 Da | 41.94 | 84.97 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 286 | 352 | 2.62692E-39 | - |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 293 | 338 | 6.3E-11 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 50 | 213 | 1.3E-31 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 289 | 354 | 2.36E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 286 | 354 | 1.3E-16 | IPR036638 |
| SMART | SM00353 | finulus | 295 | 344 | 1.3E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 289 | 338 | 16.678659 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 242 | - | - |
| Coils | Coil | Coil | 328 | 355 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_010909816.1 | transcription factor MYC2 [Elaeis guineensis] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A843V060 | BHLH domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_024376 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology