Basic Information
Locus ID:
gene.Posoc02g11870
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 202332426 | 202333838 | - | gene.Posoc02g11870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 51,135.52 Da | 40.41 | 85.94 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 291 | 357 | 4.48663E-39 | - |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 298 | 343 | 6.4E-11 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 50 | 218 | 1.5E-32 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 292 | 357 | 4.97E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 291 | 359 | 5.1E-16 | IPR036638 |
| SMART | SM00353 | finulus | 300 | 349 | 1.3E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 294 | 343 | 16.678659 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 263 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 263 | - | - |
| Coils | Coil | Coil | 333 | 360 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_039121779.1 | transcription factor MYC3-like [Dioscorea cayenensis subsp. rotundata] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A843V060 | BHLH domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_024376 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology