Basic Information
Locus ID:
gene.Posoc02g11210
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
beta-N-acetylhexosaminidase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 191550269 | 191551482 | + | gene.Posoc02g11210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 35,066.81 Da | 34.92 | 63.12 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00325 | chitinase_GH19 | 72 | 302 | 9.00073E-123 | - |
| CDD | cd06921 | ChtBD1_GH19_hevein | 25 | 64 | 1.63627E-15 | - |
| Pfam | PF00182 | Chitinase class I | 71 | 302 | 2.9E-137 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 26 | 63 | 1.5E-11 | IPR001002 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 26 | 69 | 6.55E-13 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 67 | 309 | 2.47E-112 | IPR023346 |
| Gene3D | G3DSA:1.10.530.10 | - | 71 | 303 | 9.4E-124 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 24 | 65 | 1.9E-13 | IPR036861 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 154 | 211 | 9.4E-124 | - |
| SMART | SM00270 | ChitinBD_3 | 26 | 63 | 5.2E-14 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 2 | 309 | 3.9E-126 | IPR016283 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 17 | 6.0 | - |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 24 | 65 | 10.647158 | IPR001002 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 215 | 225 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 36 | 55 | - | IPR018371 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 89 | 111 | - | IPR000726 |
| PRINTS | PR00451 | Chitin-binding domain signature | 34 | 42 | 1.5E-5 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 49 | 56 | 1.5E-5 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 42 | 49 | 1.5E-5 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_010941404.1 | chitinase 1 [Elaeis guineensis] | 0 |
| P93680 | Endochitinase OS=Persea americana OX=3435 GN=chi1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6I9SKR7 | chitinase OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105059691 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology